Package Bio :: Package Emboss :: Module Applications :: Class PrimerSearchCommandline
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Class PrimerSearchCommandline

source code

                     object --+            
                              |            
Application.AbstractCommandline --+        
                                  |        
          _EmbossMinimalCommandLine --+    
                                      |    
                     _EmbossCommandLine --+
                                          |
                                         PrimerSearchCommandline

Commandline object for the primersearch program from EMBOSS.

Instance Methods [hide private]
 
__init__(self, cmd='primersearch', **kwargs)
Create a new instance of a command line wrapper object.
source code
 
set_parameter(self, name, value=None)
Set a commandline option for a program.
source code

Inherited from _EmbossCommandLine (private): _validate

Inherited from Application.AbstractCommandline: __repr__, __str__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, cmd='primersearch', **kwargs)
(Constructor)

source code 

Create a new instance of a command line wrapper object.

Overrides: object.__init__
(inherited documentation)

set_parameter(self, name, value=None)

source code 

Set a commandline option for a program.

Overrides: Application.AbstractCommandline.set_parameter
(inherited documentation)