Package Bio :: Package Ndb :: Class NdbParser
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Class NdbParser

source code

markupbase.ParserBase --+    
                        |    
       sgmllib.SGMLParser --+
                            |
                           NdbParser

Parses Ndb sequence data into a Record object. data available at: http://ndbserver.rutgers.edu/NDB/NDBATLAS/index.html

Instance Methods [hide private]
 
reset(self)
Reset this instance.
source code
 
parse(self, handle) source code
 
feed(self, handle)
Feed in ndb data for scanning.
source code
 
handle_data(self, newtext) source code
 
start_h1(self, attrs) source code
 
end_h1(self) source code
 
start_h2(self, attrs) source code
 
end_h2(self) source code
 
start_ul(self, attrs) source code
 
end_ul(self) source code
 
start_sub(self, attrs) source code
 
end_sub(self) source code
 
start_li(self, attrs) source code
 
end_li(self) source code
 
do_br(self, attrs) source code
 
start_i(self, attrs) source code
 
end_i(self) source code
 
_parse_chain(self) source code
 
_flush_text(self) source code

Inherited from sgmllib.SGMLParser: __init__, close, convert_charref, convert_codepoint, convert_entityref, error, finish_endtag, finish_shorttag, finish_starttag, get_starttag_text, goahead, handle_charref, handle_comment, handle_decl, handle_endtag, handle_entityref, handle_pi, handle_starttag, parse_endtag, parse_pi, parse_starttag, report_unbalanced, setliteral, setnomoretags, unknown_charref, unknown_endtag, unknown_entityref, unknown_starttag

Inherited from sgmllib.SGMLParser (private): _convert_ref

Inherited from markupbase.ParserBase: getpos, parse_comment, parse_declaration, parse_marked_section, unknown_decl, updatepos

Inherited from markupbase.ParserBase (private): _parse_doctype_attlist, _parse_doctype_element, _parse_doctype_entity, _parse_doctype_notation, _parse_doctype_subset, _scan_name

Class Variables [hide private]

Inherited from sgmllib.SGMLParser: entity_or_charref, entitydefs

Inherited from sgmllib.SGMLParser (private): _decl_otherchars

Method Details [hide private]

reset(self)

source code 

Reset this instance. Loses all unprocessed data.

Overrides: markupbase.ParserBase.reset

feed(self, handle)

source code 

Feed in ndb data for scanning. handle is a file-like object containing ndb data. consumer is a Consumer object that will receive events as the ndb data is scanned.

Overrides: sgmllib.SGMLParser.feed

handle_data(self, newtext)

source code 
Overrides: sgmllib.SGMLParser.handle_data