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Package Bio
:: Package Align
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Package Align
source code
Code for dealing with sequence alignments.
Submodules
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Bio.Align.AlignInfo
:
Extract information from alignment objects.
Bio.Align.Applications
:
Alignment command line tool wrappers.
Bio.Align.Applications._Clustalw
:
Command line wrapper for the multiple alignment program Clustal W.
Bio.Align.Applications._Dialign
:
Bio.Application command line for the multiple alignment program DIALIGN2-2.
Bio.Align.Applications._Mafft
:
Command line wrapper for the multiple alignment programme MAFFT.
Bio.Align.Applications._Muscle
:
Command line wrapper for the multiple alignment program MUSCLE.
Bio.Align.Applications._Prank
:
Command line wrapper for the multiple alignment program PRANK.
Bio.Align.Applications._Probcons
:
Command line wrapper for the multiple alignment program PROBCONS.
Bio.Align.Applications._TCoffee
:
Command line wrapper for the multiple alignment program TCOFFEE.
Bio.Align.FormatConvert
:
For conversion between different formats for representing alignments (DEPRECATED).
Bio.Align.Generic
:
Contains classes to deal with generic sequence alignment stuff not specific to a particular program or format.
Variables
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__package__
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