Module Translate
source code
Code to translate DNA or RNA into proteins (DEPRECATED).
Instead of Bio.Translate, for translation you are now encouraged to
use the Seq object's translate method, or the translate function in the
Bio.Seq module. Translate-to-stop functionality is via an optional
argument.
Bio.Seq does not offer any back-translation function like the one
here. It was concluded that a since a simple back-translation giving a
Seq or python string could only capture some of the possible back
translations, there were no practical uses for such a
method/function.
This module is now deprecated, and will be removed in a future release
of Biopython.
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unambiguous_dna_by_name = {}
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unambiguous_dna_by_id = {}
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unambiguous_rna_by_name = {}
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unambiguous_rna_by_id = {}
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ambiguous_dna_by_name = {}
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ambiguous_dna_by_id = {}
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ambiguous_rna_by_name = {}
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ambiguous_rna_by_id = {}
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__package__ = ' Bio '
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__warningregistry__ = { ( ' Bio.Translate and Bio.Transcribe are ...
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key = 15
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value = <Bio.Data.CodonTable.AmbiguousCodonTable instance at 0...
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__warningregistry__
- Value:
{ ( ' Bio.Translate and Bio.Transcribe are deprecated, and will be remove
d in a future release of Biopython. Please use the functions or object
methods defined in Bio.Seq instead (described in the tutorial). If yo
u want to continue to use this code, please get in contact with the Bi
opython developers via the mailing lists to avoid its permanent remova
l from Biopython. ' ,
<type 'exceptions.DeprecationWarning'>,
23) : True}
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value
- Value:
<Bio.Data.CodonTable.AmbiguousCodonTable instance at 0x167e908>
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