Package Bio :: Package MEME
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Package MEME

source code

Parser for dealing with text output from the MEME motif search program (DEPRECATED).

Now superseded by Bio.Motif

Class mapping: Bio.MEME.Motif.MEMEMotif -> Bio.Motif.Motif Bio.MEME.parser.MEMEParser -> Bio.Motif.MEMEParser Bio.MEME.parser.MASTParser -> Bio.Motif.MASTParser

Instead of using Bio.MEME.parser.MEMEParser class, you can use Bio.Motif.parse(handle,format="MEME")

Submodules [hide private]

Variables [hide private]
  __package__ = 'Bio.MEME'
  __warningregistry__ = {('Bio.MEME is deprecated. Please use Bi...
Variables Details [hide private]

__warningregistry__

Value:
{('Bio.MEME is deprecated. Please use Bio.Motif instead.',
  <type 'exceptions.DeprecationWarning'>,
  22): True}