Package Bio :: Package Sequencing :: Package Applications :: Module _Novoalign :: Class NovoalignCommandline
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Class NovoalignCommandline

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                     object --+    
                              |    
Application.AbstractCommandline --+
                                  |
                                 NovoalignCommandline

Command line wrapper for the short read alignment program novoalign by Novocraft.

Instance Methods [hide private]
 
__init__(self, cmd='novoalign', **kwargs)
Create a new instance of a command line wrapper object.
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Inherited from Application.AbstractCommandline: __repr__, __str__, set_parameter

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, cmd='novoalign', **kwargs)
(Constructor)

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Create a new instance of a command line wrapper object.

Overrides: object.__init__
(inherited documentation)