Package Bio :: Package SwissProt :: Module SProt :: Class SequenceParser
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Class SequenceParser

AbstractParser --+
                 |
                SequenceParser


Parses SwissProt data into a standard SeqRecord object.
Method Summary
  __init__(self, alphabet)
Initialize a SequenceParser.
  parse(self, handle)
    Inherited from AbstractParser
  parse_file(self, filename)
  parse_str(self, string)

Method Details

__init__(self, alphabet=ProteinAlphabet())
(Constructor)

Initialize a SequenceParser.

Arguments: o alphabet - The alphabet to use for the generated Seq objects. If not supplied this will default to the generic protein alphabet.

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