Implements Registry to access databases. These objects access
databases using a dictionary-like interface, where the key is the ID of
the thing to look up, and the value returned is the data associated with
the key.
Classes: DBRegistry Accesses databases with a dictionary-like
interface. DBObject Base class for Registry objects for databases.
DBGroup Groups DBObjects.
CGIDB Accesses CGI databases. EUtilsDB Accesses NCBI using EUtils.
BioSQLDB Accesses a BioSQL database. BioCorbaDB Accesses a BioCorba
database. IndexedFileDB Accesses a Mindy Indexed file.
Classes |
BioCorbaDB |
Represent a BioCorba BioSequenceCollection for SeqRecord objects. |
BioSQLDB |
Represent a BioSQL-style database to retrieve SeqRecord objects. |
CGIDB |
This class implements DBObject for accessing CGI databases. |
DBGroup |
Groups DBObjects that return the same kind of data. |
DBObject |
This is a base class for dictionary-like interfaces to
databases. |
DBRegistry |
This implements a dictionary-like interface to databases. |
EUtilsDB |
Implement DBObject for accessing EUtils databases at NCBI. |
IndexedFileDB |
Return SeqRecord objects from an indexed file. |
TextLikeMixin |
Mixin class with useful functionality for retrival of text files. |