Package Bio :: Package expressions :: Module hmmpfam
[show private | hide private]
[frames | no frames]

Module Bio.expressions.hmmpfam

Martel expression for the hmmpfam database search program in hmmer.

This has been tested with version 2.2g. I should also make it work with 2.1.1 output.

XXX This isn't completely finished and doesn't do everything quite right. The main two problems being that it isn't well tested for a wide variety of outputs and that the family line is not parsed into it's respective parts (see multitude of comments on this below).
Generated by Epydoc 2.1 on Mon Aug 27 16:43:51 2007 http://epydoc.sf.net