Package Bio :: Package formatdefs :: Module search
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Module search

source code

Variables [hide private]
  search = FormatGroup(name= "search", multirecord= 0,)
  blast = FormatGroup(name= "blast", filter= "Bio.expressions.bl...
  blastp = FormatGroup(name= "blastp", multirecord= 0,)
  blastn = FormatGroup(name= "blastn", multirecord= 0,)
  blastx = FormatGroup(name= "blastx", multirecord= 0,)
  tblastn = FormatGroup(name= "tblastn", multirecord= 0,)
  tblastx = FormatGroup(name= "tblastx", multirecord= 0,)
  ncbi_blastp = FormatObject(name= "ncbi-blastp", abbrev= "ncbi_...
  ncbi_blastn = FormatObject(name= "ncbi-blastn", abbrev= "ncbi_...
  ncbi_blastx = FormatObject(name= "ncbi-blastx", abbrev= "ncbi_...
  ncbi_tblastn = FormatObject(name= "ncbi-tblastn", abbrev= "ncb...
  ncbi_tblastx = FormatObject(name= "ncbi-tblastx", abbrev= "ncb...
  wu_blastp = FormatObject(name= "wu-blastp", abbrev= "wu_blastp...
  wu_blastn = FormatObject(name= "wu-blastn", abbrev= "wu_blastn...
  wu_blastx = FormatObject(name= "wu-blastx", abbrev= "wu_blastx...
Variables Details [hide private]

blast

Value:
FormatGroup(name= "blast", filter= "Bio.expressions.blast.ncbiblast.bl\
ast_filter", multirecord= 0,)

ncbi_blastp

Value:
FormatObject(name= "ncbi-blastp", abbrev= "ncbi_blastp", expression= "\
Bio.expressions.blast.ncbiblast.blastp", filter= "Bio.expressions.blas\
t.ncbiblast.blastp_appheader", multirecord= 0,)

ncbi_blastn

Value:
FormatObject(name= "ncbi-blastn", abbrev= "ncbi_blastn", expression= "\
Bio.expressions.blast.ncbiblast.blastn", filter= "Bio.expressions.blas\
t.ncbiblast.blastn_appheader", multirecord= 0,)

ncbi_blastx

Value:
FormatObject(name= "ncbi-blastx", abbrev= "ncbi_blastx", expression= "\
Bio.expressions.blast.ncbiblast.blastx", filter= "Bio.expressions.blas\
t.ncbiblast.blastx_appheader", multirecord= 0,)

ncbi_tblastn

Value:
FormatObject(name= "ncbi-tblastn", abbrev= "ncbi_tblastn", expression=\
 "Bio.expressions.blast.ncbiblast.tblastn", filter= "Bio.expressions.b\
last.ncbiblast.tblastn_appheader", multirecord= 0,)

ncbi_tblastx

Value:
FormatObject(name= "ncbi-tblastx", abbrev= "ncbi_tblastx", expression=\
 "Bio.expressions.blast.ncbiblast.tblastx", filter= "Bio.expressions.b\
last.ncbiblast.tblastx_appheader", multirecord= 0,)

wu_blastp

Value:
FormatObject(name= "wu-blastp", abbrev= "wu_blastp", expression= "Bio.\
expressions.blast.wublast.blastp", filter= "Bio.expressions.blast.wubl\
ast.blastp_appheader", multirecord= 0,)

wu_blastn

Value:
FormatObject(name= "wu-blastn", abbrev= "wu_blastn", expression= "Bio.\
expressions.blast.wublast.blastn", filter= "Bio.expressions.blast.wubl\
ast.blastn_appheader", multirecord= 0,)

wu_blastx

Value:
FormatObject(name= "wu-blastx", abbrev= "wu_blastx", expression= "Bio.\
expressions.blast.wublast.blastx", filter= "Bio.expressions.blast.wubl\
ast.blastx_appheader", multirecord= 0,)