Package Bio :: Package Emboss :: Module Primer
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Module Primer

source code

Code to interact with various Primer-related programs from EMBOSS.

Classes [hide private]
  PrimerSearchInputRecord
Represent the input file into the primersearch program.
  PrimerSearchParser
Parse primersearch output into a PrimerSearchOutputRecord.
  PrimerSearchOutputRecord
Represent the information from a primersearch job.
  PrimerSearchAmplifier
Represent a single amplification from a primer.
  _PrimerSearchRecordConsumer
Get output from primersearch into a PrimerSearchOutputRecord
  _PrimerSearchScanner
Scan output from the primersearch program.
  Primer3Record
Represent information from a primer3 run finding primers.
  Primer3Primers
A primer set designed by Primer3.
  Primer3Parser
Parse primer3 output into a Primer3Record.
  _Primer3RecordConsumer
Get output from prime3 into a Primer3Record
  _Primer3Scanner
Scan output from the primer3 program.
Functions [hide private]
 
_strip_and_combine(line_list)
Combine multiple lines of content separated by spaces.
source code